Changes between Version 12 and Version 13 of PromotExplorerTest
- Timestamp:
- Jul 17, 2009, 10:26:24 AM (16 years ago)
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PromotExplorerTest
v12 v13 6 6 Start ProMoT server and GUI -> load the logical library [source:/Promot/trunk/promot/kb/SignalTransd/structure/struct-ana-library.mdl] 7 7 -> load the logical toymodel from tutorial [source:/Promot/trunk/promot/kb/SignalTransd/structure/toymodel_tutorial/LOAD_toymodel.mdl] 8 -> Open the Visual Explorer for the browser tree node "struct-model" --> "toymodel" --> "whole_model"by right mouse click --> context menu --> Visual Explorer.8 -> Open the Visual Explorer for the browser tree node 'struct-model' --> 'toymodel' --> 'whole_model' by right mouse click --> context menu --> Visual Explorer. 9 9 10 10 '''Setup B: ''' [[BR]] … … 12 12 Tests to be applied: None [[BR]] 13 13 Start ProMoT server and GUI -> load [source:/Promot/trunk/promot/kb/practical-bio/LOAD.mdl] which includes the library (reduced-library) for dynamic modeling 14 -> Open the Visual Explorer for the browser tree node "dynamic-model" --> "mapk_modules" --> "mapkc"by right mouse click --> context menu --> Visual Explorer.14 -> Open the Visual Explorer for the browser tree node 'dynamic-model' --> 'mapk_modules' --> 'mapkc' by right mouse click --> context menu --> Visual Explorer. 15 15 16 16 '''Setup C: ''' [[BR]] … … 18 18 Tests to be applied: None [[BR]] 19 19 Start ProMoT server and GUI -> import a biomodels.org model (e.g. BIOMD0000000001.xml) 20 -> Open the Visual Explorer for the browser tree node "sbml-model" --> modelby right mouse click --> context menu --> Visual Explorer.20 -> Open the Visual Explorer for the browser tree node 'sbml-model' --> 'name of model' by right mouse click --> context menu --> Visual Explorer. 21 21 22 22 '''Setup D: ''' [[BR]] 23 23 Model type: 'Unknown Model'. [[BR]] 24 24 Tests to be applied: None [[BR]] 25 Start ProMoT server and GUI -> load [source:/Promot/trunk/promot/kb/practical/LOAD.mdl] which loads the 'tank' model -> Open the Visual Explorer for the browser tree node "sbml-model" --> "mapk_modules" --> "mapkc"by right mouse click --> context menu --> Visual Explorer.25 Start ProMoT server and GUI -> load [source:/Promot/trunk/promot/kb/practical/LOAD.mdl] which loads the 'tank' model -> Open the Visual Explorer for the browser tree node 'tank-plant' --> 'mc-tank-plant' by right mouse click --> context menu --> Visual Explorer. 26 26 27 27 === JUnit Tests === … … 35 35 === Tests === 36 36 37 4. Import/export layout [[BR]] Save layout (Model --> Export --> Export Layout) in a file (e.g. layout.graphml) in the home directory, change editing mode to 'Editing', move the compounds 'lig1' and 'ph2' slightly, move the edge handle of inhibition edge '!r1-->not_r1_r2_a2' slightly, import layout (Model --> Import --> Import Layout) from a file (e.g. layout.graphml). The positions of the compounds 'lig1' and 'ph2' and edge handle of inhibition edge '!r1-->not_r1_r2_a2' should be the same as before. --> TODO: use JUnit test.37 4. Import/export layout [[BR]] Save layout (Model --> Export --> Export Layout) in a file (e.g. layout.graphml) in the home directory, change editing mode to 'Editing', move the compounds 'lig1' and 'ph2' slightly, move the edge handle of inhibition edge '!r1-->not_r1_r2_a2' slightly, import layout (Model --> Import --> Import Layout) from a file (e.g. layout.graphml). The positions of the compounds 'lig1' and 'ph2' and edge handle of inhibition edge '!r1-->not_r1_r2_a2' should be the same as before. [[BR]] --> TODO: use JUnit test. 38 38 39 39 5. Export graphics [[BR]] Open export dialog (Model --> Export --> Export Graphics), a dialog should appear with six options for formats (eps, ps, svg, emf, png, gif), export the view with each of the formats using default options. The results should look like the view in the Visual Explorer. 40 40 41 6. Export logical model [[BR]] Output logical model with default options, click button 'Generate Model', export should perform without errors, check resulting files, click button 'Close' should exit the dialog. --> TODO: use JUnit test.41 6. Export logical model [[BR]] Output logical model with default options, click button 'Generate Model', export should perform without errors, check resulting files, click button 'Close' should exit the dialog. [[BR]] --> TODO: use JUnit test. 42 42 43 43 7. Edit scenarios, new/copy/rename/remove/mappings [[BR]]