Changes between Version 2 and Version 3 of ExceptionsDuringTest


Ignore:
Timestamp:
Aug 3, 2009, 2:11:12 PM (16 years ago)
Author:
kolczyk
Comment:

--

Legend:

Unmodified
Added
Removed
Modified

  • ExceptionsDuringTest

    v2 v3  
    55Exception at start of PromotUI (during batch sbml import using GUI/current libsbml):
    66
    7 Exception in thread "AWT-EventQueue-0" java.lang.ClassCastException
    8         at javax.swing.LayoutComparator.compare(LayoutComparator.java:61)
    9         at java.util.Arrays.mergeSort(Arrays.java:1270)
    10         at java.util.Arrays.mergeSort(Arrays.java:1282)
    11         at java.util.Arrays.mergeSort(Arrays.java:1281)
    12         at java.util.Arrays.sort(Arrays.java:1210)
    13         at java.util.Collections.sort(Collections.java:159)
    14         at javax.swing.SortingFocusTraversalPolicy.enumerateAndSortCycle(SortingFocusTraversalPolicy.java:119)
    15         at javax.swing.SortingFocusTraversalPolicy.getFirstComponent(SortingFocusTraversalPolicy.java:434)
    16         at javax.swing.LayoutFocusTraversalPolicy.getFirstComponent(LayoutFocusTraversalPolicy.java:148)
    17         at javax.swing.SortingFocusTraversalPolicy.getDefaultComponent(SortingFocusTraversalPolicy.java:511)
    18         at java.awt.FocusTraversalPolicy.getInitialComponent(FocusTraversalPolicy.java:152)
    19         at java.awt.DefaultKeyboardFocusManager.dispatchEvent(DefaultKeyboardFocusManager.java:334)
    20         at java.awt.Component.dispatchEventImpl(Component.java:4282)
    21         at java.awt.Container.dispatchEventImpl(Container.java:2116)
    22         at java.awt.Window.dispatchEventImpl(Window.java:2429)
    23         at java.awt.Component.dispatchEvent(Component.java:4240)
    24         at java.awt.EventQueue.dispatchEvent(EventQueue.java:599)
    25         at java.awt.SequencedEvent.dispatch(SequencedEvent.java:98)
    26         at java.awt.EventQueue.dispatchEvent(EventQueue.java:597)
    27         at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:273)
    28         at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:183)
    29         at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:173)
    30         at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:168)
    31         at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:160)
    32         at java.awt.EventDispatchThread.run(EventDispatchThread.java:121)
     7        Exception in thread "AWT-EventQueue-0" java.lang.ClassCastException [[BR]]
     8        at javax.swing.LayoutComparator.compare(LayoutComparator.java:61) [[BR]]
     9        at java.util.Arrays.mergeSort(Arrays.java:1270) [[BR]]
     10        at java.util.Arrays.mergeSort(Arrays.java:1282) [[BR]]
     11        at java.util.Arrays.mergeSort(Arrays.java:1281) [[BR]]
     12        at java.util.Arrays.sort(Arrays.java:1210) [[BR]]
     13        at java.util.Collections.sort(Collections.java:159) [[BR]]
     14        at javax.swing.SortingFocusTraversalPolicy.enumerateAndSortCycle(SortingFocusTraversalPolicy.java:119) [[BR]]
     15        at javax.swing.SortingFocusTraversalPolicy.getFirstComponent(SortingFocusTraversalPolicy.java:434) [[BR]]
     16        at javax.swing.LayoutFocusTraversalPolicy.getFirstComponent(LayoutFocusTraversalPolicy.java:148) [[BR]]
     17        at javax.swing.SortingFocusTraversalPolicy.getDefaultComponent(SortingFocusTraversalPolicy.java:511) [[BR]]
     18        at java.awt.FocusTraversalPolicy.getInitialComponent(FocusTraversalPolicy.java:152) [[BR]]
     19        at java.awt.DefaultKeyboardFocusManager.dispatchEvent(DefaultKeyboardFocusManager.java:334) [[BR]]
     20        at java.awt.Component.dispatchEventImpl(Component.java:4282) [[BR]]
     21        at java.awt.Container.dispatchEventImpl(Container.java:2116) [[BR]]
     22        at java.awt.Window.dispatchEventImpl(Window.java:2429) [[BR]]
     23        at java.awt.Component.dispatchEvent(Component.java:4240) [[BR]]
     24        at java.awt.EventQueue.dispatchEvent(EventQueue.java:599) [[BR]]
     25        at java.awt.SequencedEvent.dispatch(SequencedEvent.java:98) [[BR]]
     26        at java.awt.EventQueue.dispatchEvent(EventQueue.java:597) [[BR]]
     27        at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:273) [[BR]]
     28        at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:183) [[BR]]
     29        at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:173) [[BR]]
     30        at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:168) [[BR]]
     31        at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:160) [[BR]]
     32        at java.awt.EventDispatchThread.run(EventDispatchThread.java:121) [[BR]]
    3333
    3434scheinbar ist ein parent (window), wahrscheinlich promotUI noch null, die
    … …  
    4646  wahrscheinlich node null node.getName results in exLisp that node not present (disposed?), vermeidbar in CheckerNode.java
    4747 
    48   Exception in thread "Checker" java.lang.NullPointerException
    49         at org.mpg.dcts.promot.vizedit.graph.InfoVariables.getVariableInfo(InfoVariables.java:62)
    50         at org.mpg.dcts.promot.vizedit.checker.CheckerNode.checkDefaultValuesDynamic(CheckerNode.java:304)
    51         at org.mpg.dcts.promot.vizedit.checker.CheckerNode.check(CheckerNode.java:98)
    52         at org.mpg.dcts.promot.vizedit.checker.ModuleGraphCheckController$1.run(ModuleGraphCheckController.java:146)
     48        Exception in thread "Checker" java.lang.NullPointerException [[BR]]
     49        at org.mpg.dcts.promot.vizedit.graph.InfoVariables.getVariableInfo(InfoVariables.java:62) [[BR]]
     50        at org.mpg.dcts.promot.vizedit.checker.CheckerNode.checkDefaultValuesDynamic(CheckerNode.java:304) [[BR]]
     51        at org.mpg.dcts.promot.vizedit.checker.CheckerNode.check(CheckerNode.java:98) [[BR]]
     52        at org.mpg.dcts.promot.vizedit.checker.ModuleGraphCheckController$1.run(ModuleGraphCheckController.java:146) [[BR]]
    5353 
    5454---------------------
    5555
    56  sbml import + layout (reproduzierbar, anzahl variiert)
     56sbml import + layout (reproduzierbar, anzahl variiert) 
    5757  filename: /data/bio/werkzeuge/SBMLeditor-1.3.3/data/release_16June2009_sbmls/curated/BIOMD0000000175.xml
    5858 
    5959  exception, during layout of compartment, danach terminals alle rechte untere ecke     
    60 Exception in thread "AWT-EventQueue-0" java.util.NoSuchElementException: Vector Enumeration
    61         at java.util.Vector$1.nextElement(Vector.java:305)
    62         at org.tigris.gef.base.SelectionManager.paint(SelectionManager.java:242)
    63         at org.tigris.gef.base.Editor.paint(Editor.java:440)
    64         at org.tigris.gef.graph.presentation.JGraphInternalPane.paintComponent(JGraphInternalPane.java:29)
    65         at javax.swing.JComponent.paint(JComponent.java:1022)
    66         at javax.swing.JComponent.paintToOffscreen(JComponent.java:5104)
    67         at javax.swing.BufferStrategyPaintManager.paint(BufferStrategyPaintManager.java:285)
    68         at javax.swing.RepaintManager.paint(RepaintManager.java:1132)
    69         at javax.swing.JComponent._paintImmediately(JComponent.java:5052)
    70         at javax.swing.JComponent.paintImmediately(JComponent.java:4862)
    71         at javax.swing.RepaintManager.paintDirtyRegions(RepaintManager.java:727)
    72         at javax.swing.RepaintManager.paintDirtyRegions(RepaintManager.java:683)
    73         at javax.swing.RepaintManager.seqPaintDirtyRegions(RepaintManager.java:663)
    74         at javax.swing.SystemEventQueueUtilities$ComponentWorkRequest.run(SystemEventQueueUtilities.java:128)
    75         at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
    76         at java.awt.EventQueue.dispatchEvent(EventQueue.java:597)
    77         at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:273)
    78         at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:183)
    79         at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:173)
    80         at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:168)
    81         at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:160)
    82         at java.awt.EventDispatchThread.run(EventDispatchThread.java:121)
     60       
     61        Exception in thread "AWT-EventQueue-0" java.util.NoSuchElementException: Vector Enumeration [[BR]]
     62        at java.util.Vector$1.nextElement(Vector.java:305) [[BR]]
     63        at org.tigris.gef.base.SelectionManager.paint(SelectionManager.java:242) [[BR]]
     64        at org.tigris.gef.base.Editor.paint(Editor.java:440) [[BR]]
     65        at org.tigris.gef.graph.presentation.JGraphInternalPane.paintComponent(JGraphInternalPane.java:29) [[BR]]
     66        at javax.swing.JComponent.paint(JComponent.java:1022) [[BR]]
     67        at javax.swing.JComponent.paintToOffscreen(JComponent.java:5104) [[BR]]
     68        at javax.swing.BufferStrategyPaintManager.paint(BufferStrategyPaintManager.java:285) [[BR]]
     69        at javax.swing.RepaintManager.paint(RepaintManager.java:1132) [[BR]]
     70        at javax.swing.JComponent._paintImmediately(JComponent.java:5052) [[BR]]
     71        at javax.swing.JComponent.paintImmediately(JComponent.java:4862) [[BR]]
     72        at javax.swing.RepaintManager.paintDirtyRegions(RepaintManager.java:727) [[BR]]
     73        at javax.swing.RepaintManager.paintDirtyRegions(RepaintManager.java:683) [[BR]]
     74        at javax.swing.RepaintManager.seqPaintDirtyRegions(RepaintManager.java:663) [[BR]]
     75        at javax.swing.SystemEventQueueUtilities$ComponentWorkRequest.run(SystemEventQueueUtilities.java:128) [[BR]]
     76        at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209) [[BR]]
     77        at java.awt.EventQueue.dispatchEvent(EventQueue.java:597) [[BR]]
     78        at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:273) [[BR]]
     79        at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:183) [[BR]]
     80        at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:173) [[BR]]
     81        at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:168) [[BR]]
     82        at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:160) [[BR]]
     83        at java.awt.EventDispatchThread.run(EventDispatchThread.java:121) [[BR]]
    8384
    8485---------------------
    8586
    86  sbml import + layout           (tritt schlecht reproduzierbar bei verschiedenen modellen auf)
     87sbml import + layout            (tritt schlecht reproduzierbar bei verschiedenen modellen auf)
    8788          filename: /data/bio/werkzeuge/SBMLeditor-1.3.3/data/release_16June2009_sbmls/curated/BIOMD0000000201.xml
    8889          terminals in compartment hauptsaechlich in rechter unterer ecke
    8990       
    90         Exception in thread "AWT-EventQueue-0" java.util.NoSuchElementException: Vector Enumeration
    91         at java.util.Vector$1.nextElement(Vector.java:305)
    92         at org.tigris.gef.base.LayerDiagram.paintContents(LayerDiagram.java:210)
    93         at org.tigris.gef.base.Layer.paint(Layer.java:261)
    94         at org.tigris.gef.base.LayerManager.paint(LayerManager.java:143)
    95         at org.tigris.gef.base.LayerManager.paint(LayerManager.java:135)
    96         at org.tigris.gef.base.Editor.paint(Editor.java:439)
    97         at org.tigris.gef.graph.presentation.JGraphInternalPane.paintComponent(JGraphInternalPane.java:29)
    98         at javax.swing.JComponent.paint(JComponent.java:1022)
    99         at javax.swing.JComponent.paintToOffscreen(JComponent.java:5104)
    100         at javax.swing.BufferStrategyPaintManager.paint(BufferStrategyPaintManager.java:285)
    101         at javax.swing.RepaintManager.paint(RepaintManager.java:1132)
    102         at javax.swing.JComponent._paintImmediately(JComponent.java:5052)
    103         at javax.swing.JComponent.paintImmediately(JComponent.java:4862)
    104         at javax.swing.RepaintManager.paintDirtyRegions(RepaintManager.java:727)
    105         at javax.swing.RepaintManager.paintDirtyRegions(RepaintManager.java:683)
    106         at javax.swing.RepaintManager.seqPaintDirtyRegions(RepaintManager.java:663)
    107         at javax.swing.SystemEventQueueUtilities$ComponentWorkRequest.run(SystemEventQueueUtilities.java:128)
    108         at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
    109         at java.awt.EventQueue.dispatchEvent(EventQueue.java:597)
    110         at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:273)
    111         at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:183)
    112         at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:173)
    113         at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:168)
    114         at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:160)
    115         at java.awt.EventDispatchThread.run(EventDispatchThread.java:121)
     91        Exception in thread "AWT-EventQueue-0" java.util.NoSuchElementException: Vector Enumeration [[BR]]
     92        at java.util.Vector$1.nextElement(Vector.java:305) [[BR]]
     93        at org.tigris.gef.base.LayerDiagram.paintContents(LayerDiagram.java:210) [[BR]]
     94        at org.tigris.gef.base.Layer.paint(Layer.java:261) [[BR]]
     95        at org.tigris.gef.base.LayerManager.paint(LayerManager.java:143) [[BR]]
     96        at org.tigris.gef.base.LayerManager.paint(LayerManager.java:135) [[BR]]
     97        at org.tigris.gef.base.Editor.paint(Editor.java:439) [[BR]]
     98        at org.tigris.gef.graph.presentation.JGraphInternalPane.paintComponent(JGraphInternalPane.java:29) [[BR]]
     99        at javax.swing.JComponent.paint(JComponent.java:1022) [[BR]]
     100        at javax.swing.JComponent.paintToOffscreen(JComponent.java:5104) [[BR]]
     101        at javax.swing.BufferStrategyPaintManager.paint(BufferStrategyPaintManager.java:285) [[BR]]
     102        at javax.swing.RepaintManager.paint(RepaintManager.java:1132) [[BR]]
     103        at javax.swing.JComponent._paintImmediately(JComponent.java:5052) [[BR]]
     104        at javax.swing.JComponent.paintImmediately(JComponent.java:4862) [[BR]]
     105        at javax.swing.RepaintManager.paintDirtyRegions(RepaintManager.java:727) [[BR]]
     106        at javax.swing.RepaintManager.paintDirtyRegions(RepaintManager.java:683) [[BR]]
     107        at javax.swing.RepaintManager.seqPaintDirtyRegions(RepaintManager.java:663) [[BR]]
     108        at javax.swing.SystemEventQueueUtilities$ComponentWorkRequest.run(SystemEventQueueUtilities.java:128) [[BR]]
     109        at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209) [[BR]]
     110        at java.awt.EventQueue.dispatchEvent(EventQueue.java:597) [[BR]]
     111        at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:273) [[BR]]
     112        at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:183) [[BR]]
     113        at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:173) [[BR]]
     114        at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:168) [[BR]]
     115        at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:160) [[BR]]
     116        at java.awt.EventDispatchThread.run(EventDispatchThread.java:121) [[BR]]
    116117       
    117        
     118
     119---------------------
     120Open EditDetails dialog (schlecht reproduzierbar)       
     121       
     122        java.lang.NullPointerException  [[BR]]
     123        at org.mpg.dcts.promot.dialogs.SlotDetailsDialog.getAllowedClasses(SlotDetailsDialog.java:462) [[BR]]
     124        at org.mpg.dcts.promot.dialogs.SlotDetailsDialog.createInputPanel(SlotDetailsDialog.java:292) [[BR]]
     125        at org.mpg.dcts.promot.dialogs.SlotDetailsDialog.init(SlotDetailsDialog.java:225) [[BR]]
     126        at org.mpg.dcts.promot.dialogs.SlotDetailsDialog.<init>(SlotDetailsDialog.java:210) [[BR]]
     127        at org.mpg.dcts.promot.dialogs.SlotDetailsDialog.<init>(SlotDetailsDialog.java:194) [[BR]]
     128        at org.mpg.dcts.promot.vizedit.cmds.CmdNodeDetails.doIt(CmdNodeDetails.java:78) [[BR]]
     129        at org.mpg.dcts.promot.vizedit.Editor$1$1.run(Editor.java:289) [[BR]]