(define-module
  :class "toymodel"
  :super-classes ("struct-model"))


(define-module
  :class "nucleus"
  :super-classes ("toymodel")
  :icon "../../SignalTransd/structure/icons/struct/nucleus.gif"
  :geometry-width "123"
  :geometry-height "332"
  :terminals
  (("input1"
    :is-eq-to "k3p1_k3p2_tf1.input1"
    :geometry-side "TOP"
    :geometry-position "0.101626016"
    :line nil)
   ("input2"
    :is-eq-to "k3p1_k3p2_tf1.input2"
    :geometry-side "TOP"
    :geometry-position "0.92276424"))
  :modules
  (("drain"
    :is-a "drain"
    :geometry-x "63"
    :geometry-y "282")
   ("k3p1_k3p2_tf1"
    :is-a "and-2"
    :geometry-x "63"
    :geometry-y "150")
   ("tf1"
    :is-a "transfactor"
    :geometry-x "62"
    :geometry-y "218"))
  :links
  (("k3p1_k3p2_tf1output_tf1input"
    :terminals ("k3p1_k3p2_tf1.output" "tf1.input" "drain.input")
    :nodes (("63" "210"))
    :edges (("0" "-1" nil) ("1" "-1" nil) ("2" "-1" nil)))))


(define-module
  :class "cell"
  :super-classes ("toymodel")
  :icon "../../SignalTransd/structure/icons/struct/cell.gif"
  :geometry-width "737"
  :geometry-height "832"
  :terminals
  (("input"
    :is-eq-to "struct_adapter_compound.input"
    :geometry-side "TOP"
    :geometry-position "0.33582088")
   ("input1"
    :is-eq-to "struct_adapter_compound1.input"
    :geometry-side "TOP"
    :geometry-position "0.1458616")
   ("input2"
    :is-eq-to "struct_adapter_gate.input"
    :geometry-side "TOP"
    :geometry-position "0.75373137")
   ("output"
    :is-eq-to "struct_adapter_compound1.output"
    :geometry-side "BOTTOM"
    :geometry-position "0.1458616"
    :line (("32" "688"))))
  :modules
  (("a1_not_ph1_k1"
    :is-a "somehow-2"
    :geometry-x "169"
    :geometry-y "403")
   ("a1_ph2"
    :is-a "activ"
    :geometry-x "678"
    :geometry-y "327")
   ("a2"
    :is-a "adapter"
    :geometry-x "543"
    :geometry-y "390")
   ("and_2_2"
    :is-a "and-2-2"
    :geometry-x "543"
    :geometry-y "474")
   ("drain"
    :is-a "drain"
    :geometry-x "393"
    :geometry-y "423")
   ("k1"
    :is-a "kinase"
    :geometry-x "169"
    :geometry-y "471")
   ("k1_k3r_k3p1"
    :is-a "and-2"
    :geometry-x "180"
    :geometry-y "538")
   ("k2"
    :is-a "kinase"
    :geometry-x "543"
    :geometry-y "533")
   ("k2_k3r_k3p2"
    :is-a "and-2"
    :geometry-x "531"
    :geometry-y "626")
   ("k3p1"
    :is-a "kinase"
    :geometry-x "179"
    :geometry-y "606")
   ("k3p2"
    :is-a "kinase"
    :geometry-x "530"
    :geometry-y "692")
   ("not_lr"
    :is-a "not"
    :geometry-x "256"
    :geometry-y "261")
   ("not_r1_r2_a2"
    :is-a "and-2"
    :geometry-x "543"
    :geometry-y "279")
   ("not_ud"
    :is-a "not"
    :geometry-x "61"
    :geometry-y "399")
   ("nucleus"
    :is-a "nucleus"
    :geometry-x "386"
    :geometry-y "758")
   ("ph1"
    :is-a "phosphatase"
    :geometry-x "73"
    :geometry-y "606")
   ("ph2"
    :is-a "phosphatase"
    :geometry-x "678"
    :geometry-y "471")
   ("phosphatase"
    :is-a "phosphatase"
    :geometry-x "555"
    :geometry-y "197")
   ("r1"
    :is-a "receptor"
    :geometry-x "255"
    :geometry-y "198")
   ("r1_a1"
    :is-a "activ"
    :geometry-x "181"
    :geometry-y "198")
   ("source"
    :is-a "source"
    :geometry-x "393"
    :geometry-y "330")
   ("struct_adapter_compound"
    :is-a "struct-adapter-compound"
    :geometry-x "255"
    :geometry-y "52")
   ("struct_adapter_compound1"
    :is-a "struct-adapter-compound"
    :geometry-x "32"
    :geometry-y "274")
   ("struct_adapter_gate"
    :is-a "struct-adapter-gate"
    :geometry-x "555"
    :geometry-y "93"))
  :links
  (("a1_not_ph1_k1output_k1input"
    :terminals ("a1_not_ph1_k1.output" "k1.input" "k1_k3r_k3p1.input1"
                "and_2_2.input1")
    :nodes (("169" "463"))
    :edges (("0" "-1" nil) ("1" "-1" nil) ("2" "-1" nil) ("3" "-1" nil)))
   ("a1_ph2output_ph2input"
    :terminals ("ph2.input" "and_2_2.input3" "a1_ph2.output")
    :nodes (("678" "463"))
    :edges (("0" "-1" nil) ("1" "-1" nil) ("2" "-1" nil)))
   ("and_2_2output_k2input"
    :terminals ("and_2_2.output" "k2.input" "k2_k3r_k3p2.input2")
    :nodes (("543" "525"))
    :edges (("0" "-1" nil) ("1" "-1" nil) ("2" "-1" nil)))
   ("k1_k3r_k3p1output_k3p1input"
    :terminals ("k1_k3r_k3p1.output" "k3p1.input" "nucleus.input1"
                "ph1.input")
    :nodes (("179" "598"))
    :edges (("0" "-1" nil) ("1" "-1" nil) ("2" "-1" (("179" "714")))
            ("3" "-1" nil) ("-1" "-1" nil)))
   ("k2_k3r_k3p2output_k3p2input"
    :terminals ("k2_k3r_k3p2.output" "k3p2.input" "nucleus.input2")
    :nodes (("531" "684"))
    :edges (("0" "-1" nil) ("1" "-1" nil) ("2" "-1" (("531" "714")))))
   ("not_lroutput_not_r1_r2_a2input1"
    :terminals ("not_lr.output" "not_r1_r2_a2.input1")
    :edges (("0" "1" nil)))
   ("not_r1_r2_a2output_a2input"
    :terminals ("not_r1_r2_a2.output" "a2.input" "and_2_2.input2")
    :nodes (("543" "382") ("543" "336"))
    :edges (("0" "-2" nil) ("1" "-1" nil) ("2" "-1" nil)
            ("-1" "-2" nil)))
   ("not_udoutput_a1_not_ph1_k1input1"
    :terminals ("not_ud.output" "a1_not_ph1_k1.input1"))
   ("r1_a1output_a1_not_ph1_k1input2"
    :terminals ("r1_a1.output" "a1_not_ph1_k1.input2"))
   ("sourceoutput_draininput"
    :terminals ("source.output" "drain.input"))
   ("struct_adapter_compoundoutput_r1input"
    :terminals ("struct_adapter_compound.output" "r1.input"
                "r1_a1.input1" "not_lr.input")
    :nodes (("255" "189"))
    :edges (("0" "-1" nil) ("1" "-1" nil) ("2" "-1" nil) ("3" "-1" nil)))
   ("struct_adapter_gateoutput_not_r1_r2_a2input2"
    :terminals ("struct_adapter_gate.output" "not_r1_r2_a2.input2"
                "phosphatase.input")
    :nodes (("555" "192"))
    :edges (("0" "-1" nil) ("1" "-1" nil) ("2" "-1" nil)))))


(define-module
  :class "whole_model"
  :super-classes ("toymodel")
  :properties
  (("model"
    :value "yes"))
  :geometry-width "320"
  :geometry-height "433"
  :modules
  (("cell"
    :is-a "cell"
    :geometry-x "155"
    :geometry-y "262")
   ("lig1"
    :is-a "source"
    :geometry-x "122"
    :geometry-y "78")
   ("lig2"
    :is-a "source"
    :geometry-x "197"
    :geometry-y "78"))
  :links
  (("lig1output_cellinput"
    :terminals ("lig1.output" "cell.input"))
   ("lig2output_cellinput0"
    :terminals ("lig2.output" "cell.input0"))))